Cluster: HRGMv2_4681_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4681
- CGC Family ID: CGCFAM_01637
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4681_10 | HRGMv2_4681_10_13 | 16830 | 19607 | - | GH2 |
| CAZyme | HRGMv2_4681_10 | HRGMv2_4681_10_14 | 19618 | 21363 | - | GH2 |
| TC | HRGMv2_4681_10 | HRGMv2_4681_10_15 | 21374 | 22879 | - | 3.A.1.1.22 |
| TC | HRGMv2_4681_10 | HRGMv2_4681_10_16 | 23049 | 23963 | - | 3.A.1.1.48 |
| TC | HRGMv2_4681_10 | HRGMv2_4681_10_17 | 23960 | 24871 | - | 3.A.1.1.20 |
Gene ID: HRGMv2_4681_10_13
Type: CAZyme
Location: 16830 - 19607 (-)
Type: CAZyme
Location: 16830 - 19607 (-)
Gene ID: HRGMv2_4681_10_14
Type: CAZyme
Location: 19618 - 21363 (-)
Type: CAZyme
Location: 19618 - 21363 (-)
Gene ID: HRGMv2_4681_10_15
Type: TC
Location: 21374 - 22879 (-)
Type: TC
Location: 21374 - 22879 (-)
Gene ID: HRGMv2_4681_10_16
Type: TC
Location: 23049 - 23963 (-)
Type: TC
Location: 23049 - 23963 (-)
Gene ID: HRGMv2_4681_10_17
Type: TC
Location: 23960 - 24871 (-)
Type: TC
Location: 23960 - 24871 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-449
Genus
CAG-449
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.