Cluster: HRGMv2_4681_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4681
- CGC Family ID: CGCFAM_02406
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4681_9 | HRGMv2_4681_9_38 | 38860 | 40200 | + | 2.A.38.4.3 |
| TC | HRGMv2_4681_9 | HRGMv2_4681_9_39 | 40210 | 40869 | + | 2.A.38.4.6 |
| NULL(UNKNOWN) | HRGMv2_4681_9 | HRGMv2_4681_9_40 | 40866 | 41579 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4681_9 | HRGMv2_4681_9_41 | 41684 | 42502 | + | GT8 |
| CAZyme | HRGMv2_4681_9 | HRGMv2_4681_9_42 | 42483 | 44183 | + | GH2 |
Gene ID: HRGMv2_4681_9_38
Type: TC
Location: 38860 - 40200 (+)
Type: TC
Location: 38860 - 40200 (+)
Gene ID: HRGMv2_4681_9_39
Type: TC
Location: 40210 - 40869 (+)
Type: TC
Location: 40210 - 40869 (+)
Gene ID: HRGMv2_4681_9_40
Type:
Location: 40866 - 41579 (-)
Type:
Location: 40866 - 41579 (-)
Gene ID: HRGMv2_4681_9_41
Type: CAZyme
Location: 41684 - 42502 (+)
Type: CAZyme
Location: 41684 - 42502 (+)
Gene ID: HRGMv2_4681_9_42
Type: CAZyme
Location: 42483 - 44183 (+)
Type: CAZyme
Location: 42483 - 44183 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-449
Genus
CAG-449
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.