Cluster: HRGMv2_4681_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4681
- CGC Family ID: CGCFAM_05359
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4681_8 | HRGMv2_4681_8_61 | 69208 | 70914 | + | 3.A.1.106.8 |
| TC | HRGMv2_4681_8 | HRGMv2_4681_8_62 | 70907 | 72709 | + | 3.A.1.135.5 |
| NULL(UNKNOWN) | HRGMv2_4681_8 | HRGMv2_4681_8_63 | 73299 | 74582 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4681_8 | HRGMv2_4681_8_64 | 74594 | 76348 | + | CBM32 |
| NULL(UNKNOWN) | HRGMv2_4681_8 | HRGMv2_4681_8_65 | 76361 | 76837 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4681_8 | HRGMv2_4681_8_66 | 76838 | 79942 | + | GH3 |
Gene ID: HRGMv2_4681_8_61
Type: TC
Location: 69208 - 70914 (+)
Type: TC
Location: 69208 - 70914 (+)
Gene ID: HRGMv2_4681_8_62
Type: TC
Location: 70907 - 72709 (+)
Type: TC
Location: 70907 - 72709 (+)
Gene ID: HRGMv2_4681_8_63
Type:
Location: 73299 - 74582 (+)
Type:
Location: 73299 - 74582 (+)
Gene ID: HRGMv2_4681_8_64
Type: CAZyme
Location: 74594 - 76348 (+)
Type: CAZyme
Location: 74594 - 76348 (+)
Gene ID: HRGMv2_4681_8_65
Type:
Location: 76361 - 76837 (+)
Type:
Location: 76361 - 76837 (+)
Gene ID: HRGMv2_4681_8_66
Type: CAZyme
Location: 76838 - 79942 (+)
Type: CAZyme
Location: 76838 - 79942 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-449
Genus
CAG-449
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.