Cluster: HRGMv2_4681_CGC10
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4681
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4681_6 | HRGMv2_4681_6_54 | 52879 | 53160 | - | 3.D.6.1.1 |
| NULL(UNKNOWN) | HRGMv2_4681_6 | HRGMv2_4681_6_55 | 53166 | 53351 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4681_6 | HRGMv2_4681_6_56 | 53351 | 53983 | - | 3.D.6.1.2 |
| TC | HRGMv2_4681_6 | HRGMv2_4681_6_57 | 53985 | 54650 | - | 3.D.6.1.2 |
| pfam | HRGMv2_4681_6 | HRGMv2_4681_6_58 | 54655 | 55221 | - | FMN_bind |
| pfam | HRGMv2_4681_6 | HRGMv2_4681_6_59 | 55223 | 57235 | - | NQR2_RnfD_RnfE |
| TC | HRGMv2_4681_6 | HRGMv2_4681_6_60 | 57237 | 58574 | - | 3.D.6.1.2 |
| pfam | HRGMv2_4681_6 | HRGMv2_4681_6_61 | 58589 | 59161 | - | PTAC |
| pfam | HRGMv2_4681_6 | HRGMv2_4681_6_62 | 59308 | 59898 | - | Zeta_toxin | AAA_33 |
| TC | HRGMv2_4681_6 | HRGMv2_4681_6_63 | 59998 | 62721 | - | 3.A.1.122.2 |
| NULL(UNKNOWN) | HRGMv2_4681_6 | HRGMv2_4681_6_64 | 62911 | 65637 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_4681_6 | HRGMv2_4681_6_65 | 65650 | 65772 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4681_6 | HRGMv2_4681_6_66 | 65777 | 68896 | - | GH3 |
Gene ID: HRGMv2_4681_6_54
Type: TC
Location: 52879 - 53160 (-)
Type: TC
Location: 52879 - 53160 (-)
Gene ID: HRGMv2_4681_6_55
Type:
Location: 53166 - 53351 (-)
Type:
Location: 53166 - 53351 (-)
Gene ID: HRGMv2_4681_6_56
Type: TC
Location: 53351 - 53983 (-)
Type: TC
Location: 53351 - 53983 (-)
Gene ID: HRGMv2_4681_6_57
Type: TC
Location: 53985 - 54650 (-)
Type: TC
Location: 53985 - 54650 (-)
Gene ID: HRGMv2_4681_6_58
Type: pfam
Location: 54655 - 55221 (-)
Type: pfam
Location: 54655 - 55221 (-)
Gene ID: HRGMv2_4681_6_59
Type: pfam
Location: 55223 - 57235 (-)
Type: pfam
Location: 55223 - 57235 (-)
Gene ID: HRGMv2_4681_6_60
Type: TC
Location: 57237 - 58574 (-)
Type: TC
Location: 57237 - 58574 (-)
Gene ID: HRGMv2_4681_6_61
Type: pfam
Location: 58589 - 59161 (-)
Type: pfam
Location: 58589 - 59161 (-)
Gene ID: HRGMv2_4681_6_62
Type: pfam
Location: 59308 - 59898 (-)
Type: pfam
Location: 59308 - 59898 (-)
Gene ID: HRGMv2_4681_6_63
Type: TC
Location: 59998 - 62721 (-)
Type: TC
Location: 59998 - 62721 (-)
Gene ID: HRGMv2_4681_6_64
Type:
Location: 62911 - 65637 (-)
Type:
Location: 62911 - 65637 (-)
Gene ID: HRGMv2_4681_6_65
Type:
Location: 65650 - 65772 (-)
Type:
Location: 65650 - 65772 (-)
Gene ID: HRGMv2_4681_6_66
Type: CAZyme
Location: 65777 - 68896 (-)
Type: CAZyme
Location: 65777 - 68896 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-449
Genus
CAG-449
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.