Cluster: HRGMv2_4681_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4681
- CGC Family ID: CGCFAM_06289
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4681_1 | HRGMv2_4681_1_121 | 138828 | 140678 | + | GT51 |
| pfam | HRGMv2_4681_1 | HRGMv2_4681_1_122 | 140675 | 141157 | - | YgbB |
| pfam | HRGMv2_4681_1 | HRGMv2_4681_1_123 | 141159 | 142271 | - | MMR_HSR1 | FeoB_N | YchF-GTPase_C |
| TC | HRGMv2_4681_1 | HRGMv2_4681_1_124 | 142343 | 145090 | - | 3.A.1.122.13 |
| TC | HRGMv2_4681_1 | HRGMv2_4681_1_125 | 145087 | 147048 | - | 3.A.1.3.16 |
Gene ID: HRGMv2_4681_1_121
Type: CAZyme
Location: 138828 - 140678 (+)
Type: CAZyme
Location: 138828 - 140678 (+)
Gene ID: HRGMv2_4681_1_122
Type: pfam
Location: 140675 - 141157 (-)
Type: pfam
Location: 140675 - 141157 (-)
Gene ID: HRGMv2_4681_1_123
Type: pfam
Location: 141159 - 142271 (-)
Type: pfam
Location: 141159 - 142271 (-)
Gene ID: HRGMv2_4681_1_124
Type: TC
Location: 142343 - 145090 (-)
Type: TC
Location: 142343 - 145090 (-)
Gene ID: HRGMv2_4681_1_125
Type: TC
Location: 145087 - 147048 (-)
Type: TC
Location: 145087 - 147048 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-449
Genus
CAG-449
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.