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Cluster: HRGMv2_4680_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4680_40 HRGMv2_4680_40_2 784 2322 + 2.A.2.2.1
CAZyme HRGMv2_4680_40 HRGMv2_4680_40_3 2306 3931 + GH13_31
CAZyme HRGMv2_4680_40 HRGMv2_4680_40_4 3931 6171 + GH36
CAZyme HRGMv2_4680_40 HRGMv2_4680_40_5 6173 9211 + GH2
Gene ID: HRGMv2_4680_40_2
Type: TC
Location: 784 - 2322 (+)
Gene ID: HRGMv2_4680_40_3
Type: CAZyme
Location: 2306 - 3931 (+)
Gene ID: HRGMv2_4680_40_4
Type: CAZyme
Location: 3931 - 6171 (+)
Gene ID: HRGMv2_4680_40_5
Type: CAZyme
Location: 6173 - 9211 (+)

Taxonomic Lineage

Domain
Bacteria
Order
RFN20
Family
CAG-826

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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