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Cluster: HRGMv2_4680_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4680_20 HRGMv2_4680_20_2 444 2246 + 3.A.3.4.2
TC HRGMv2_4680_20 HRGMv2_4680_20_3 2359 3069 + 3.A.3.4.1
pfam HRGMv2_4680_20 HRGMv2_4680_20_4 3221 4324 + F_bP_aldolase
pfam HRGMv2_4680_20 HRGMv2_4680_20_5 4422 5582 - PFK
CAZyme HRGMv2_4680_20 HRGMv2_4680_20_6 5579 6706 - CE9
pfam HRGMv2_4680_20 HRGMv2_4680_20_7 6824 7663 + Aldose_epim
TF HRGMv2_4680_20 HRGMv2_4680_20_8 7660 8415 - HTH_DeoR
TC HRGMv2_4680_20 HRGMv2_4680_20_9 8575 9417 + 2.A.102.4.4
pfam HRGMv2_4680_20 HRGMv2_4680_20_10 9630 10733 - NMT1
TC HRGMv2_4680_20 HRGMv2_4680_20_11 10784 11683 - 3.A.1.16.3
TC HRGMv2_4680_20 HRGMv2_4680_20_12 11697 12674 - 3.A.1.16.4
Gene ID: HRGMv2_4680_20_2
Type: TC
Location: 444 - 2246 (+)
Gene ID: HRGMv2_4680_20_3
Type: TC
Location: 2359 - 3069 (+)
Gene ID: HRGMv2_4680_20_4
Type: pfam
Location: 3221 - 4324 (+)
Gene ID: HRGMv2_4680_20_5
Type: pfam
Location: 4422 - 5582 (-)
Gene ID: HRGMv2_4680_20_6
Type: CAZyme
Location: 5579 - 6706 (-)
Gene ID: HRGMv2_4680_20_7
Type: pfam
Location: 6824 - 7663 (+)
Gene ID: HRGMv2_4680_20_8
Type: TF
Location: 7660 - 8415 (-)
Gene ID: HRGMv2_4680_20_9
Type: TC
Location: 8575 - 9417 (+)
Gene ID: HRGMv2_4680_20_10
Type: pfam
Location: 9630 - 10733 (-)
Gene ID: HRGMv2_4680_20_11
Type: TC
Location: 10784 - 11683 (-)
Gene ID: HRGMv2_4680_20_12
Type: TC
Location: 11697 - 12674 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RFN20
→
Family
CAG-826
→
Genus
Onthovivens
→
Species
Onthovivens sp944368945

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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