Cluster: HRGMv2_4680_CGC3
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 7
- Substrate: alpha-glucan
- Genome ID: HRGMv2_4680
- CGC Family ID: CGCFAM_00106
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4680_6 | HRGMv2_4680_6_33 | 41326 | 42615 | - | GH13 |
| CAZyme | HRGMv2_4680_6 | HRGMv2_4680_6_34 | 42719 | 44230 | + | GH77 |
| CAZyme | HRGMv2_4680_6 | HRGMv2_4680_6_35 | 44273 | 45562 | - | GH13 |
| CAZyme | HRGMv2_4680_6 | HRGMv2_4680_6_36 | 45650 | 47161 | + | GH77 |
| CAZyme | HRGMv2_4680_6 | HRGMv2_4680_6_37 | 47455 | 48978 | + | GH77 |
| pfam | HRGMv2_4680_6 | HRGMv2_4680_6_38 | 49037 | 50347 | + | SBP_bac_8 |
| TC | HRGMv2_4680_6 | HRGMv2_4680_6_39 | 50410 | 51930 | + | 3.A.1.1.27 |
| TC | HRGMv2_4680_6 | HRGMv2_4680_6_40 | 51927 | 52793 | + | 3.A.1.1.27 |
| CAZyme | HRGMv2_4680_6 | HRGMv2_4680_6_41 | 52798 | 54429 | + | GH13_36 |
| TC | HRGMv2_4680_6 | HRGMv2_4680_6_42 | 54442 | 56991 | + | 3.A.1.1.26 |
| NULL(UNKNOWN) | HRGMv2_4680_6 | HRGMv2_4680_6_43 | 57003 | 57551 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_4680_6 | HRGMv2_4680_6_44 | 57544 | 58296 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4680_6 | HRGMv2_4680_6_45 | 58283 | 61363 | + | GH13_14 |
Gene ID: HRGMv2_4680_6_33
Type: CAZyme
Location: 41326 - 42615 (-)
Type: CAZyme
Location: 41326 - 42615 (-)
Gene ID: HRGMv2_4680_6_34
Type: CAZyme
Location: 42719 - 44230 (+)
Type: CAZyme
Location: 42719 - 44230 (+)
Gene ID: HRGMv2_4680_6_35
Type: CAZyme
Location: 44273 - 45562 (-)
Type: CAZyme
Location: 44273 - 45562 (-)
Gene ID: HRGMv2_4680_6_36
Type: CAZyme
Location: 45650 - 47161 (+)
Type: CAZyme
Location: 45650 - 47161 (+)
Gene ID: HRGMv2_4680_6_37
Type: CAZyme
Location: 47455 - 48978 (+)
Type: CAZyme
Location: 47455 - 48978 (+)
Gene ID: HRGMv2_4680_6_38
Type: pfam
Location: 49037 - 50347 (+)
Type: pfam
Location: 49037 - 50347 (+)
Gene ID: HRGMv2_4680_6_39
Type: TC
Location: 50410 - 51930 (+)
Type: TC
Location: 50410 - 51930 (+)
Gene ID: HRGMv2_4680_6_40
Type: TC
Location: 51927 - 52793 (+)
Type: TC
Location: 51927 - 52793 (+)
Gene ID: HRGMv2_4680_6_41
Type: CAZyme
Location: 52798 - 54429 (+)
Type: CAZyme
Location: 52798 - 54429 (+)
Gene ID: HRGMv2_4680_6_42
Type: TC
Location: 54442 - 56991 (+)
Type: TC
Location: 54442 - 56991 (+)
Gene ID: HRGMv2_4680_6_43
Type:
Location: 57003 - 57551 (+)
Type:
Location: 57003 - 57551 (+)
Gene ID: HRGMv2_4680_6_44
Type:
Location: 57544 - 58296 (+)
Type:
Location: 57544 - 58296 (+)
Gene ID: HRGMv2_4680_6_45
Type: CAZyme
Location: 58283 - 61363 (+)
Type: CAZyme
Location: 58283 - 61363 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-826
Genus
Onthovivens
Species
Onthovivens sp944368945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.