Cluster: HRGMv2_4680_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4680
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4680_3 | HRGMv2_4680_3_52 | 53344 | 54516 | - | GT4 |
| pfam | HRGMv2_4680_3 | HRGMv2_4680_3_53 | 54513 | 56126 | - | LPG_synthase_TM |
| TC | HRGMv2_4680_3 | HRGMv2_4680_3_54 | 56215 | 58023 | + | 3.A.1.106.8 |
| TC | HRGMv2_4680_3 | HRGMv2_4680_3_55 | 58027 | 59964 | + | 3.A.1.135.5 |
| pfam | HRGMv2_4680_3 | HRGMv2_4680_3_56 | 59954 | 61576 | - | FTHFS |
| TC | HRGMv2_4680_3 | HRGMv2_4680_3_57 | 61580 | 62257 | - | 3.A.25.2.1 |
Gene ID: HRGMv2_4680_3_52
Type: CAZyme
Location: 53344 - 54516 (-)
Type: CAZyme
Location: 53344 - 54516 (-)
Gene ID: HRGMv2_4680_3_53
Type: pfam
Location: 54513 - 56126 (-)
Type: pfam
Location: 54513 - 56126 (-)
Gene ID: HRGMv2_4680_3_54
Type: TC
Location: 56215 - 58023 (+)
Type: TC
Location: 56215 - 58023 (+)
Gene ID: HRGMv2_4680_3_55
Type: TC
Location: 58027 - 59964 (+)
Type: TC
Location: 58027 - 59964 (+)
Gene ID: HRGMv2_4680_3_56
Type: pfam
Location: 59954 - 61576 (-)
Type: pfam
Location: 59954 - 61576 (-)
Gene ID: HRGMv2_4680_3_57
Type: TC
Location: 61580 - 62257 (-)
Type: TC
Location: 61580 - 62257 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-826
Genus
Onthovivens
Species
Onthovivens sp944368945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.