Cluster: HRGMv2_4679_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4679
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4679_5 | HRGMv2_4679_5_14 | 15373 | 16311 | + | 3.A.1.1.18 |
| pfam | HRGMv2_4679_5 | HRGMv2_4679_5_15 | 16328 | 17755 | + | Big_2 |
| NULL(UNKNOWN) | HRGMv2_4679_5 | HRGMv2_4679_5_16 | 17767 | 19194 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4679_5 | HRGMv2_4679_5_17 | 19204 | 20622 | + | GH16_3 |
| TC | HRGMv2_4679_5 | HRGMv2_4679_5_18 | 20636 | 22072 | + | 3.A.1.1.26 |
Gene ID: HRGMv2_4679_5_14
Type: TC
Location: 15373 - 16311 (+)
Type: TC
Location: 15373 - 16311 (+)
Gene ID: HRGMv2_4679_5_15
Type: pfam
Location: 16328 - 17755 (+)
Type: pfam
Location: 16328 - 17755 (+)
Gene ID: HRGMv2_4679_5_16
Type:
Location: 17767 - 19194 (+)
Type:
Location: 17767 - 19194 (+)
Gene ID: HRGMv2_4679_5_17
Type: CAZyme
Location: 19204 - 20622 (+)
Type: CAZyme
Location: 19204 - 20622 (+)
Gene ID: HRGMv2_4679_5_18
Type: TC
Location: 20636 - 22072 (+)
Type: TC
Location: 20636 - 22072 (+)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.