Cluster: HRGMv2_4679_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4679
- CGC Family ID: CGCFAM_00619
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4679_3 | HRGMv2_4679_3_77 | 76370 | 78130 | + | GH2 |
| NULL(UNKNOWN) | HRGMv2_4679_3 | HRGMv2_4679_3_78 | 78109 | 78957 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4679_3 | HRGMv2_4679_3_79 | 78954 | 80003 | + | 3.A.1.11.8 |
| TC | HRGMv2_4679_3 | HRGMv2_4679_3_80 | 80188 | 80781 | + | 3.A.1.125.2 |
Gene ID: HRGMv2_4679_3_77
Type: CAZyme
Location: 76370 - 78130 (+)
Type: CAZyme
Location: 76370 - 78130 (+)
Gene ID: HRGMv2_4679_3_78
Type:
Location: 78109 - 78957 (+)
Type:
Location: 78109 - 78957 (+)
Gene ID: HRGMv2_4679_3_79
Type: TC
Location: 78954 - 80003 (+)
Type: TC
Location: 78954 - 80003 (+)
Gene ID: HRGMv2_4679_3_80
Type: TC
Location: 80188 - 80781 (+)
Type: TC
Location: 80188 - 80781 (+)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.