Cluster: HRGMv2_4679_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4679
- CGC Family ID: CGCFAM_00770
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4679_2 | HRGMv2_4679_2_114 | 157364 | 159241 | + | 3.A.1.120.6 |
| NULL(UNKNOWN) | HRGMv2_4679_2 | HRGMv2_4679_2_115 | 159270 | 159839 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4679_2 | HRGMv2_4679_2_116 | 159943 | 161661 | + | GH2 |
Gene ID: HRGMv2_4679_2_114
Type: TC
Location: 157364 - 159241 (+)
Type: TC
Location: 157364 - 159241 (+)
Gene ID: HRGMv2_4679_2_115
Type:
Location: 159270 - 159839 (+)
Type:
Location: 159270 - 159839 (+)
Gene ID: HRGMv2_4679_2_116
Type: CAZyme
Location: 159943 - 161661 (+)
Type: CAZyme
Location: 159943 - 161661 (+)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.