Cluster: HRGMv2_4679_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4679
- CGC Family ID: CGCFAM_04053
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4679_2 | HRGMv2_4679_2_107 | 151596 | 152831 | - | GH18 |
| NULL(UNKNOWN) | HRGMv2_4679_2 | HRGMv2_4679_2_108 | 152962 | 153129 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4679_2 | HRGMv2_4679_2_109 | 153126 | 153911 | + | adh_short | KR | adh_short_C2 |
| TC | HRGMv2_4679_2 | HRGMv2_4679_2_110 | 153898 | 155475 | + | 3.A.1.121.4 |
Gene ID: HRGMv2_4679_2_107
Type: CAZyme
Location: 151596 - 152831 (-)
Type: CAZyme
Location: 151596 - 152831 (-)
Gene ID: HRGMv2_4679_2_108
Type:
Location: 152962 - 153129 (+)
Type:
Location: 152962 - 153129 (+)
Gene ID: HRGMv2_4679_2_109
Type: pfam
Location: 153126 - 153911 (+)
Type: pfam
Location: 153126 - 153911 (+)
Gene ID: HRGMv2_4679_2_110
Type: TC
Location: 153898 - 155475 (+)
Type: TC
Location: 153898 - 155475 (+)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.