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Cluster: HRGMv2_4679_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4679_2 HRGMv2_4679_2_75 109317 111968 + GH28
NULL(UNKNOWN) HRGMv2_4679_2 HRGMv2_4679_2_76 112046 114577 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_4679_2 HRGMv2_4679_2_77 114652 116058 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4679_2 HRGMv2_4679_2_78 116063 116971 + 3.A.1.1.34
TC HRGMv2_4679_2 HRGMv2_4679_2_79 116972 117847 + 3.A.1.1.39
CAZyme HRGMv2_4679_2 HRGMv2_4679_2_80 117852 120119 + GH65
CAZyme HRGMv2_4679_2 HRGMv2_4679_2_81 120107 122170 + GH65
TC HRGMv2_4679_2 HRGMv2_4679_2_82 122167 123951 + 3.A.1.1.26
CAZyme HRGMv2_4679_2 HRGMv2_4679_2_83 123935 125536 + GH28
Gene ID: HRGMv2_4679_2_75
Type: CAZyme
Location: 109317 - 111968 (+)
Gene ID: HRGMv2_4679_2_76
Type:
Location: 112046 - 114577 (+)
Gene ID: HRGMv2_4679_2_77
Type:
Location: 114652 - 116058 (+)
Gene ID: HRGMv2_4679_2_78
Type: TC
Location: 116063 - 116971 (+)
Gene ID: HRGMv2_4679_2_79
Type: TC
Location: 116972 - 117847 (+)
Gene ID: HRGMv2_4679_2_80
Type: CAZyme
Location: 117852 - 120119 (+)
Gene ID: HRGMv2_4679_2_81
Type: CAZyme
Location: 120107 - 122170 (+)
Gene ID: HRGMv2_4679_2_82
Type: TC
Location: 122167 - 123951 (+)
Gene ID: HRGMv2_4679_2_83
Type: CAZyme
Location: 123935 - 125536 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RFN20
→
Family
CAG-826
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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