Cluster: HRGMv2_4679_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4679
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4679_14 | HRGMv2_4679_14_30 | 34197 | 35876 | - | 3.A.1.1.28 |
| sulfatase | HRGMv2_4679_14 | HRGMv2_4679_14_31 | 35866 | 36807 | - | S1_17 |
| CAZyme | HRGMv2_4679_14 | HRGMv2_4679_14_32 | 36779 | 37498 | - | CE4 |
| pfam | HRGMv2_4679_14 | HRGMv2_4679_14_33 | 37500 | 40388 | - | Glyco_hydro_42 | DUF4832 |
| pfam | HRGMv2_4679_14 | HRGMv2_4679_14_34 | 40402 | 42141 | - | Big_3 | Big_3 |
| TC | HRGMv2_4679_14 | HRGMv2_4679_14_35 | 42138 | 43034 | - | 3.A.1.1.11 |
| TC | HRGMv2_4679_14 | HRGMv2_4679_14_36 | 43027 | 43968 | - | 3.A.1.1.5 |
Gene ID: HRGMv2_4679_14_30
Type: TC
Location: 34197 - 35876 (-)
Type: TC
Location: 34197 - 35876 (-)
Gene ID: HRGMv2_4679_14_31
Type: sulfatase
Location: 35866 - 36807 (-)
Type: sulfatase
Location: 35866 - 36807 (-)
Gene ID: HRGMv2_4679_14_32
Type: CAZyme
Location: 36779 - 37498 (-)
Type: CAZyme
Location: 36779 - 37498 (-)
Gene ID: HRGMv2_4679_14_33
Type: pfam
Location: 37500 - 40388 (-)
Type: pfam
Location: 37500 - 40388 (-)
Gene ID: HRGMv2_4679_14_34
Type: pfam
Location: 40402 - 42141 (-)
Type: pfam
Location: 40402 - 42141 (-)
Gene ID: HRGMv2_4679_14_35
Type: TC
Location: 42138 - 43034 (-)
Type: TC
Location: 42138 - 43034 (-)
Gene ID: HRGMv2_4679_14_36
Type: TC
Location: 43027 - 43968 (-)
Type: TC
Location: 43027 - 43968 (-)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.