Cluster: HRGMv2_4679_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4679
- CGC Family ID: CGCFAM_01207
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4679_11 | HRGMv2_4679_11_23 | 23759 | 24598 | + | 3.A.1.132.3 |
| peptidase | HRGMv2_4679_11 | HRGMv2_4679_11_24 | 24613 | 25842 | + | M24.UPB |
| pfam | HRGMv2_4679_11 | HRGMv2_4679_11_25 | 25835 | 26497 | + | DNA_alkylation |
| CAZyme | HRGMv2_4679_11 | HRGMv2_4679_11_26 | 26508 | 27977 | + | GH77 |
Gene ID: HRGMv2_4679_11_23
Type: TC
Location: 23759 - 24598 (+)
Type: TC
Location: 23759 - 24598 (+)
Gene ID: HRGMv2_4679_11_24
Type: peptidase
Location: 24613 - 25842 (+)
Type: peptidase
Location: 24613 - 25842 (+)
Gene ID: HRGMv2_4679_11_25
Type: pfam
Location: 25835 - 26497 (+)
Type: pfam
Location: 25835 - 26497 (+)
Gene ID: HRGMv2_4679_11_26
Type: CAZyme
Location: 26508 - 27977 (+)
Type: CAZyme
Location: 26508 - 27977 (+)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.