Cluster: HRGMv2_4679_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4679
- CGC Family ID: CGCFAM_06289
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4679_6 | HRGMv2_4679_6_32 | 34762 | 36603 | + | GT51 |
| pfam | HRGMv2_4679_6 | HRGMv2_4679_6_33 | 36581 | 37069 | - | YgbB |
| pfam | HRGMv2_4679_6 | HRGMv2_4679_6_34 | 37066 | 38178 | - | MMR_HSR1 | FeoB_N | YchF-GTPase_C |
| TC | HRGMv2_4679_6 | HRGMv2_4679_6_35 | 38263 | 40980 | - | 3.A.1.122.3 |
| TC | HRGMv2_4679_6 | HRGMv2_4679_6_36 | 40973 | 43078 | - | 3.A.1.122.3 |
Gene ID: HRGMv2_4679_6_32
Type: CAZyme
Location: 34762 - 36603 (+)
Type: CAZyme
Location: 34762 - 36603 (+)
Gene ID: HRGMv2_4679_6_33
Type: pfam
Location: 36581 - 37069 (-)
Type: pfam
Location: 36581 - 37069 (-)
Gene ID: HRGMv2_4679_6_34
Type: pfam
Location: 37066 - 38178 (-)
Type: pfam
Location: 37066 - 38178 (-)
Gene ID: HRGMv2_4679_6_35
Type: TC
Location: 38263 - 40980 (-)
Type: TC
Location: 38263 - 40980 (-)
Gene ID: HRGMv2_4679_6_36
Type: TC
Location: 40973 - 43078 (-)
Type: TC
Location: 40973 - 43078 (-)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.