Cluster: HRGMv2_4679_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4679
- CGC Family ID: CGCFAM_05855
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4679_5 | HRGMv2_4679_5_63 | 79306 | 80700 | + | 2.A.66.1.26 |
| NULL(UNKNOWN) | HRGMv2_4679_5 | HRGMv2_4679_5_64 | 80697 | 80903 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4679_5 | HRGMv2_4679_5_65 | 81046 | 82353 | + | LPG_synthase_TM |
| CAZyme | HRGMv2_4679_5 | HRGMv2_4679_5_66 | 82354 | 83526 | + | GT4 |
Gene ID: HRGMv2_4679_5_63
Type: TC
Location: 79306 - 80700 (+)
Type: TC
Location: 79306 - 80700 (+)
Gene ID: HRGMv2_4679_5_64
Type:
Location: 80697 - 80903 (+)
Type:
Location: 80697 - 80903 (+)
Gene ID: HRGMv2_4679_5_65
Type: pfam
Location: 81046 - 82353 (+)
Type: pfam
Location: 81046 - 82353 (+)
Gene ID: HRGMv2_4679_5_66
Type: CAZyme
Location: 82354 - 83526 (+)
Type: CAZyme
Location: 82354 - 83526 (+)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.