Cluster: HRGMv2_4679_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4679
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4679_1 | HRGMv2_4679_1_157 | 158121 | 159074 | - | GT28 |
| TC | HRGMv2_4679_1 | HRGMv2_4679_1_158 | 159071 | 160150 | - | 2.A.103.1.3 |
| pfam | HRGMv2_4679_1 | HRGMv2_4679_1_159 | 160113 | 161333 | - | Mur_ligase_M |
| TC | HRGMv2_4679_1 | HRGMv2_4679_1_160 | 161330 | 162283 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_4679_1_157
Type: CAZyme
Location: 158121 - 159074 (-)
Type: CAZyme
Location: 158121 - 159074 (-)
Gene ID: HRGMv2_4679_1_158
Type: TC
Location: 159071 - 160150 (-)
Type: TC
Location: 159071 - 160150 (-)
Gene ID: HRGMv2_4679_1_159
Type: pfam
Location: 160113 - 161333 (-)
Type: pfam
Location: 160113 - 161333 (-)
Gene ID: HRGMv2_4679_1_160
Type: TC
Location: 161330 - 162283 (-)
Type: TC
Location: 161330 - 162283 (-)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.