dbCAN Logo

Cluster: HRGMv2_4678_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4678_10 HRGMv2_4678_10_4 5383 6351 + 3.A.1.1.10
TC HRGMv2_4678_10 HRGMv2_4678_10_5 6355 7371 + 3.A.1.1.9
NULL(UNKNOWN) HRGMv2_4678_10 HRGMv2_4678_10_6 7388 10390 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4678_10 HRGMv2_4678_10_7 10402 12420 + GH163
pfam HRGMv2_4678_10 HRGMv2_4678_10_8 12425 14518 + Big_2
CAZyme HRGMv2_4678_10 HRGMv2_4678_10_9 14518 16314 + GH146
pfam HRGMv2_4678_10 HRGMv2_4678_10_10 16332 18554 + Flg_new
pfam HRGMv2_4678_10 HRGMv2_4678_10_11 18805 20550 + Flg_new
CAZyme HRGMv2_4678_10 HRGMv2_4678_10_12 20702 22315 + GH20
Gene ID: HRGMv2_4678_10_4
Type: TC
Location: 5383 - 6351 (+)
Gene ID: HRGMv2_4678_10_5
Type: TC
Location: 6355 - 7371 (+)
Gene ID: HRGMv2_4678_10_6
Type:
Location: 7388 - 10390 (+)
Gene ID: HRGMv2_4678_10_7
Type: CAZyme
Location: 10402 - 12420 (+)
Gene ID: HRGMv2_4678_10_8
Type: pfam
Location: 12425 - 14518 (+)
Gene ID: HRGMv2_4678_10_9
Type: CAZyme
Location: 14518 - 16314 (+)
Gene ID: HRGMv2_4678_10_10
Type: pfam
Location: 16332 - 18554 (+)
Gene ID: HRGMv2_4678_10_11
Type: pfam
Location: 18805 - 20550 (+)
Gene ID: HRGMv2_4678_10_12
Type: CAZyme
Location: 20702 - 22315 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RFN20
→
Family
CAG-826
→
Genus
UBA4951
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List