Cluster: HRGMv2_4678_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4678
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4678_2 | HRGMv2_4678_2_55 | 77950 | 79761 | + | 3.A.25.2.1 |
| NULL(UNKNOWN) | HRGMv2_4678_2 | HRGMv2_4678_2_56 | 79796 | 80065 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4678_2 | HRGMv2_4678_2_57 | 81045 | 82334 | + | 3.A.16.1.1 |
| pfam | HRGMv2_4678_2 | HRGMv2_4678_2_58 | 82517 | 83443 | + | Fic |
| CAZyme | HRGMv2_4678_2 | HRGMv2_4678_2_59 | 83478 | 86402 | - | GH163 |
Gene ID: HRGMv2_4678_2_55
Type: TC
Location: 77950 - 79761 (+)
Type: TC
Location: 77950 - 79761 (+)
Gene ID: HRGMv2_4678_2_56
Type:
Location: 79796 - 80065 (-)
Type:
Location: 79796 - 80065 (-)
Gene ID: HRGMv2_4678_2_57
Type: TC
Location: 81045 - 82334 (+)
Type: TC
Location: 81045 - 82334 (+)
Gene ID: HRGMv2_4678_2_58
Type: pfam
Location: 82517 - 83443 (+)
Type: pfam
Location: 82517 - 83443 (+)
Gene ID: HRGMv2_4678_2_59
Type: CAZyme
Location: 83478 - 86402 (-)
Type: CAZyme
Location: 83478 - 86402 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-826
Genus
UBA4951
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.