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Cluster: HRGMv2_4678_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4678_2 HRGMv2_4678_2_30 35538 37781 - CBM67 | GH78
TF HRGMv2_4678_2 HRGMv2_4678_2_31 38125 39369 + 0041150
sulfatase HRGMv2_4678_2 HRGMv2_4678_2_32 39366 40253 - S1_17
CAZyme HRGMv2_4678_2 HRGMv2_4678_2_33 40250 41857 - GH78
CAZyme HRGMv2_4678_2 HRGMv2_4678_2_34 41854 44037 - GH112
pfam HRGMv2_4678_2 HRGMv2_4678_2_35 44039 45325 - GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
TC HRGMv2_4678_2 HRGMv2_4678_2_36 45328 46176 - 3.A.1.1.11
TC HRGMv2_4678_2 HRGMv2_4678_2_37 46179 47090 - 3.A.1.1.36
Gene ID: HRGMv2_4678_2_30
Type: CAZyme
Location: 35538 - 37781 (-)
Gene ID: HRGMv2_4678_2_31
Type: TF
Location: 38125 - 39369 (+)
Gene ID: HRGMv2_4678_2_32
Type: sulfatase
Location: 39366 - 40253 (-)
Gene ID: HRGMv2_4678_2_33
Type: CAZyme
Location: 40250 - 41857 (-)
Gene ID: HRGMv2_4678_2_34
Type: CAZyme
Location: 41854 - 44037 (-)
Gene ID: HRGMv2_4678_2_35
Type: pfam
Location: 44039 - 45325 (-)
Gene ID: HRGMv2_4678_2_36
Type: TC
Location: 45328 - 46176 (-)
Gene ID: HRGMv2_4678_2_37
Type: TC
Location: 46179 - 47090 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RFN20
→
Family
CAG-826
→
Genus
UBA4951
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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