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Cluster: HRGMv2_4678_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4678_21 HRGMv2_4678_21_7 10995 12452 - 4.C.1.1.16
STP HRGMv2_4678_21 HRGMv2_4678_21_8 12540 12875 - AraC_binding
pfam HRGMv2_4678_21 HRGMv2_4678_21_9 12862 15990 - Big_2 | VanZ
CAZyme HRGMv2_4678_21 HRGMv2_4678_21_10 16177 17403 - GH109
peptidase HRGMv2_4678_21 HRGMv2_4678_21_11 17585 18820 - M29.UNW
NULL(UNKNOWN) HRGMv2_4678_21 HRGMv2_4678_21_12 18884 20074 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4678_21 HRGMv2_4678_21_13 20067 20969 - 3.A.1.132.6
TF HRGMv2_4678_21 HRGMv2_4678_21_14 20960 21283 - GntR
pfam HRGMv2_4678_21 HRGMv2_4678_21_15 21388 22518 + Epimerase_2
TC HRGMv2_4678_21 HRGMv2_4678_21_16 22515 23132 - 9.B.18.1.3
TC HRGMv2_4678_21 HRGMv2_4678_21_17 23240 24247 + 9.B.18.2.1
Gene ID: HRGMv2_4678_21_7
Type: TC
Location: 10995 - 12452 (-)
Gene ID: HRGMv2_4678_21_8
Type: STP
Location: 12540 - 12875 (-)
Gene ID: HRGMv2_4678_21_9
Type: pfam
Location: 12862 - 15990 (-)
Gene ID: HRGMv2_4678_21_10
Type: CAZyme
Location: 16177 - 17403 (-)
Gene ID: HRGMv2_4678_21_11
Type: peptidase
Location: 17585 - 18820 (-)
Gene ID: HRGMv2_4678_21_12
Type:
Location: 18884 - 20074 (-)
Gene ID: HRGMv2_4678_21_13
Type: TC
Location: 20067 - 20969 (-)
Gene ID: HRGMv2_4678_21_14
Type: TF
Location: 20960 - 21283 (-)
Gene ID: HRGMv2_4678_21_15
Type: pfam
Location: 21388 - 22518 (+)
Gene ID: HRGMv2_4678_21_16
Type: TC
Location: 22515 - 23132 (-)
Gene ID: HRGMv2_4678_21_17
Type: TC
Location: 23240 - 24247 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RFN20
→
Family
CAG-826
→
Genus
UBA4951
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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