Cluster: HRGMv2_4678_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4678
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4678_1 | HRGMv2_4678_1_31 | 42780 | 43814 | + | GH130_5 |
| NULL(UNKNOWN) | HRGMv2_4678_1 | HRGMv2_4678_1_32 | 43817 | 48055 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4678_1 | HRGMv2_4678_1_33 | 48070 | 49983 | + | GH163 |
| pfam | HRGMv2_4678_1 | HRGMv2_4678_1_34 | 49986 | 51338 | + | Big_2 | Big-like |
| NULL(UNKNOWN) | HRGMv2_4678_1 | HRGMv2_4678_1_35 | 51350 | 53932 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4678_1 | HRGMv2_4678_1_36 | 53938 | 55542 | + | GH3 |
| TC | HRGMv2_4678_1 | HRGMv2_4678_1_37 | 55605 | 56507 | - | 3.A.1.1.20 |
Gene ID: HRGMv2_4678_1_31
Type: CAZyme
Location: 42780 - 43814 (+)
Type: CAZyme
Location: 42780 - 43814 (+)
Gene ID: HRGMv2_4678_1_32
Type:
Location: 43817 - 48055 (+)
Type:
Location: 43817 - 48055 (+)
Gene ID: HRGMv2_4678_1_33
Type: CAZyme
Location: 48070 - 49983 (+)
Type: CAZyme
Location: 48070 - 49983 (+)
Gene ID: HRGMv2_4678_1_34
Type: pfam
Location: 49986 - 51338 (+)
Type: pfam
Location: 49986 - 51338 (+)
Gene ID: HRGMv2_4678_1_35
Type:
Location: 51350 - 53932 (+)
Type:
Location: 51350 - 53932 (+)
Gene ID: HRGMv2_4678_1_36
Type: CAZyme
Location: 53938 - 55542 (+)
Type: CAZyme
Location: 53938 - 55542 (+)
Gene ID: HRGMv2_4678_1_37
Type: TC
Location: 55605 - 56507 (-)
Type: TC
Location: 55605 - 56507 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-826
Genus
UBA4951
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.