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Cluster: HRGMv2_4678_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4678_19 HRGMv2_4678_19_14 15863 16753 - 2.A.119.2.1
TC HRGMv2_4678_19 HRGMv2_4678_19_15 16823 17650 + 3.A.1.132.3
pfam HRGMv2_4678_19 HRGMv2_4678_19_16 17745 18050 + Trns_repr_metal
TC HRGMv2_4678_19 HRGMv2_4678_19_17 18052 20619 + 3.A.3.5.15
pfam HRGMv2_4678_19 HRGMv2_4678_19_18 20621 21595 - A_deaminase | AMP_deaminase
pfam HRGMv2_4678_19 HRGMv2_4678_19_19 21681 22604 - DegV
TC HRGMv2_4678_19 HRGMv2_4678_19_20 22803 23576 + 9.B.20.1.4
pfam HRGMv2_4678_19 HRGMv2_4678_19_21 23581 24132 - Adenine_glyco
pfam HRGMv2_4678_19 HRGMv2_4678_19_22 24119 24628 - DNA_binding_1
CAZyme HRGMv2_4678_19 HRGMv2_4678_19_23 24628 26655 - GH151
Gene ID: HRGMv2_4678_19_14
Type: TC
Location: 15863 - 16753 (-)
Gene ID: HRGMv2_4678_19_15
Type: TC
Location: 16823 - 17650 (+)
Gene ID: HRGMv2_4678_19_16
Type: pfam
Location: 17745 - 18050 (+)
Gene ID: HRGMv2_4678_19_17
Type: TC
Location: 18052 - 20619 (+)
Gene ID: HRGMv2_4678_19_18
Type: pfam
Location: 20621 - 21595 (-)
Gene ID: HRGMv2_4678_19_19
Type: pfam
Location: 21681 - 22604 (-)
Gene ID: HRGMv2_4678_19_20
Type: TC
Location: 22803 - 23576 (+)
Gene ID: HRGMv2_4678_19_21
Type: pfam
Location: 23581 - 24132 (-)
Gene ID: HRGMv2_4678_19_22
Type: pfam
Location: 24119 - 24628 (-)
Gene ID: HRGMv2_4678_19_23
Type: CAZyme
Location: 24628 - 26655 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RFN20
→
Family
CAG-826
→
Genus
UBA4951
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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