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Cluster: HRGMv2_4678_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4678_18 HRGMv2_4678_18_3 1766 2596 - GT2
NULL(UNKNOWN) HRGMv2_4678_18 HRGMv2_4678_18_4 2606 3097 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_4678_18 HRGMv2_4678_18_5 3094 4836 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4678_18 HRGMv2_4678_18_6 4833 7301 - 3.A.1.147.6
NULL(UNKNOWN) HRGMv2_4678_18 HRGMv2_4678_18_7 7313 9685 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4678_18 HRGMv2_4678_18_8 9933 10976 - GT4
pfam HRGMv2_4678_18 HRGMv2_4678_18_9 11149 13254 + Gln-synt_C | GSIII_N | Gln-synt_C-ter
TF HRGMv2_4678_18 HRGMv2_4678_18_10 13403 14401 - LacI
CAZyme HRGMv2_4678_18 HRGMv2_4678_18_11 14663 16759 + GH36
Gene ID: HRGMv2_4678_18_3
Type: CAZyme
Location: 1766 - 2596 (-)
Gene ID: HRGMv2_4678_18_4
Type:
Location: 2606 - 3097 (-)
Gene ID: HRGMv2_4678_18_5
Type:
Location: 3094 - 4836 (-)
Gene ID: HRGMv2_4678_18_6
Type: TC
Location: 4833 - 7301 (-)
Gene ID: HRGMv2_4678_18_7
Type:
Location: 7313 - 9685 (-)
Gene ID: HRGMv2_4678_18_8
Type: CAZyme
Location: 9933 - 10976 (-)
Gene ID: HRGMv2_4678_18_9
Type: pfam
Location: 11149 - 13254 (+)
Gene ID: HRGMv2_4678_18_10
Type: TF
Location: 13403 - 14401 (-)
Gene ID: HRGMv2_4678_18_11
Type: CAZyme
Location: 14663 - 16759 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RFN20
→
Family
CAG-826
→
Genus
UBA4951
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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