dbCAN Logo

Cluster: HRGMv2_4678_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4678_13 HRGMv2_4678_13_11 12705 13961 - GH37
CAZyme HRGMv2_4678_13 HRGMv2_4678_13_12 13958 16174 - GH3
CAZyme HRGMv2_4678_13 HRGMv2_4678_13_13 16180 18567 - GH106
TF HRGMv2_4678_13 HRGMv2_4678_13_14 18785 19669 + HTH_AraC
TC HRGMv2_4678_13 HRGMv2_4678_13_15 19698 20582 - 3.A.1.1.18
TC HRGMv2_4678_13 HRGMv2_4678_13_16 20575 21504 - 3.A.1.1.34
STP HRGMv2_4678_13 HRGMv2_4678_13_17 21508 22812 - SBP_bac_1
CAZyme HRGMv2_4678_13 HRGMv2_4678_13_18 22826 27076 - CBM67
Gene ID: HRGMv2_4678_13_11
Type: CAZyme
Location: 12705 - 13961 (-)
Gene ID: HRGMv2_4678_13_12
Type: CAZyme
Location: 13958 - 16174 (-)
Gene ID: HRGMv2_4678_13_13
Type: CAZyme
Location: 16180 - 18567 (-)
Gene ID: HRGMv2_4678_13_14
Type: TF
Location: 18785 - 19669 (+)
Gene ID: HRGMv2_4678_13_15
Type: TC
Location: 19698 - 20582 (-)
Gene ID: HRGMv2_4678_13_16
Type: TC
Location: 20575 - 21504 (-)
Gene ID: HRGMv2_4678_13_17
Type: STP
Location: 21508 - 22812 (-)
Gene ID: HRGMv2_4678_13_18
Type: CAZyme
Location: 22826 - 27076 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RFN20
→
Family
CAG-826
→
Genus
UBA4951
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List