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Cluster: HRGMv2_4678_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4678_12 HRGMv2_4678_12_27 22322 24061 + 2.A.58.2.2
pfam HRGMv2_4678_12 HRGMv2_4678_12_28 24113 25780 + SMC_N
pfam HRGMv2_4678_12 HRGMv2_4678_12_29 25777 26634 - Hydrolase | HAD_2
CAZyme HRGMv2_4678_12 HRGMv2_4678_12_30 26803 29253 + GH2
CAZyme HRGMv2_4678_12 HRGMv2_4678_12_31 29274 30269 + GH130_2
TF HRGMv2_4678_12 HRGMv2_4678_12_32 30323 31171 - HTH_AraC | HTH_AraC
pfam HRGMv2_4678_12 HRGMv2_4678_12_33 31399 33804 - Big_2
CAZyme HRGMv2_4678_12 HRGMv2_4678_12_34 33824 35776 - GH163
NULL(UNKNOWN) HRGMv2_4678_12 HRGMv2_4678_12_35 35794 38751 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4678_12 HRGMv2_4678_12_36 38753 39661 - 3.A.1.1.41
Gene ID: HRGMv2_4678_12_27
Type: TC
Location: 22322 - 24061 (+)
Gene ID: HRGMv2_4678_12_28
Type: pfam
Location: 24113 - 25780 (+)
Gene ID: HRGMv2_4678_12_29
Type: pfam
Location: 25777 - 26634 (-)
Gene ID: HRGMv2_4678_12_30
Type: CAZyme
Location: 26803 - 29253 (+)
Gene ID: HRGMv2_4678_12_31
Type: CAZyme
Location: 29274 - 30269 (+)
Gene ID: HRGMv2_4678_12_32
Type: TF
Location: 30323 - 31171 (-)
Gene ID: HRGMv2_4678_12_33
Type: pfam
Location: 31399 - 33804 (-)
Gene ID: HRGMv2_4678_12_34
Type: CAZyme
Location: 33824 - 35776 (-)
Gene ID: HRGMv2_4678_12_35
Type:
Location: 35794 - 38751 (-)
Gene ID: HRGMv2_4678_12_36
Type: TC
Location: 38753 - 39661 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RFN20
→
Family
CAG-826
→
Genus
UBA4951
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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