Cluster: HRGMv2_4678_CGC13
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4678
- CGC Family ID: CGCFAM_01146
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4678_11 | HRGMv2_4678_11_37 | 50184 | 51284 | - | 3.A.1.1.22 |
| TF | HRGMv2_4678_11 | HRGMv2_4678_11_38 | 51423 | 52253 | + | HTH_AraC |
| CAZyme | HRGMv2_4678_11 | HRGMv2_4678_11_39 | 52246 | 54693 | - | GH38 |
Gene ID: HRGMv2_4678_11_37
Type: TC
Location: 50184 - 51284 (-)
Type: TC
Location: 50184 - 51284 (-)
Gene ID: HRGMv2_4678_11_38
Type: TF
Location: 51423 - 52253 (+)
Type: TF
Location: 51423 - 52253 (+)
Gene ID: HRGMv2_4678_11_39
Type: CAZyme
Location: 52246 - 54693 (-)
Type: CAZyme
Location: 52246 - 54693 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-826
Genus
UBA4951
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.