Cluster: HRGMv2_4678_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4678
- CGC Family ID: CGCFAM_01987
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4678_11 | HRGMv2_4678_11_27 | 33881 | 35776 | - | 3.A.1.1.26 |
| NULL(UNKNOWN) | HRGMv2_4678_11 | HRGMv2_4678_11_28 | 36051 | 37301 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_4678_11 | HRGMv2_4678_11_29 | 37412 | 39412 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4678_11 | HRGMv2_4678_11_30 | 39418 | 41394 | - | GH163 |
| NULL(UNKNOWN) | HRGMv2_4678_11 | HRGMv2_4678_11_31 | 41405 | 44218 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4678_11 | HRGMv2_4678_11_32 | 44225 | 45370 | - | 3.A.1.1.18 |
Gene ID: HRGMv2_4678_11_27
Type: TC
Location: 33881 - 35776 (-)
Type: TC
Location: 33881 - 35776 (-)
Gene ID: HRGMv2_4678_11_28
Type:
Location: 36051 - 37301 (-)
Type:
Location: 36051 - 37301 (-)
Gene ID: HRGMv2_4678_11_29
Type:
Location: 37412 - 39412 (-)
Type:
Location: 37412 - 39412 (-)
Gene ID: HRGMv2_4678_11_30
Type: CAZyme
Location: 39418 - 41394 (-)
Type: CAZyme
Location: 39418 - 41394 (-)
Gene ID: HRGMv2_4678_11_31
Type:
Location: 41405 - 44218 (-)
Type:
Location: 41405 - 44218 (-)
Gene ID: HRGMv2_4678_11_32
Type: TC
Location: 44225 - 45370 (-)
Type: TC
Location: 44225 - 45370 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-826
Genus
UBA4951
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.