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Cluster: HRGMv2_4678_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4678_10 HRGMv2_4678_10_28 37148 38056 + 3.A.1.1.39
NULL(UNKNOWN) HRGMv2_4678_10 HRGMv2_4678_10_29 38072 41164 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4678_10 HRGMv2_4678_10_30 41178 43151 + GH163
NULL(UNKNOWN) HRGMv2_4678_10 HRGMv2_4678_10_31 43166 45049 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4678_10 HRGMv2_4678_10_32 45051 46724 + PL37
CAZyme HRGMv2_4678_10 HRGMv2_4678_10_33 46721 49030 + GH36
TC HRGMv2_4678_10 HRGMv2_4678_10_34 49032 49757 + 3.A.1.1.38
NULL(UNKNOWN) HRGMv2_4678_10 HRGMv2_4678_10_35 49754 50638 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4678_10 HRGMv2_4678_10_36 50653 51876 + GH175
Gene ID: HRGMv2_4678_10_28
Type: TC
Location: 37148 - 38056 (+)
Gene ID: HRGMv2_4678_10_29
Type:
Location: 38072 - 41164 (+)
Gene ID: HRGMv2_4678_10_30
Type: CAZyme
Location: 41178 - 43151 (+)
Gene ID: HRGMv2_4678_10_31
Type:
Location: 43166 - 45049 (+)
Gene ID: HRGMv2_4678_10_32
Type: CAZyme
Location: 45051 - 46724 (+)
Gene ID: HRGMv2_4678_10_33
Type: CAZyme
Location: 46721 - 49030 (+)
Gene ID: HRGMv2_4678_10_34
Type: TC
Location: 49032 - 49757 (+)
Gene ID: HRGMv2_4678_10_35
Type:
Location: 49754 - 50638 (+)
Gene ID: HRGMv2_4678_10_36
Type: CAZyme
Location: 50653 - 51876 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RFN20
→
Family
CAG-826
→
Genus
UBA4951
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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