Cluster: HRGMv2_4661_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4661
- CGC Family ID: CGCFAM_03898
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4661_7 | HRGMv2_4661_7_11 | 8418 | 9047 | - | 3.A.1.105.7 |
| NULL(UNKNOWN) | HRGMv2_4661_7 | HRGMv2_4661_7_12 | 9044 | 9931 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4661_7 | HRGMv2_4661_7_13 | 10049 | 10612 | + | RecU |
| CAZyme | HRGMv2_4661_7 | HRGMv2_4661_7_14 | 10593 | 13439 | + | GT51 |
Gene ID: HRGMv2_4661_7_11
Type: TC
Location: 8418 - 9047 (-)
Type: TC
Location: 8418 - 9047 (-)
Gene ID: HRGMv2_4661_7_12
Type:
Location: 9044 - 9931 (-)
Type:
Location: 9044 - 9931 (-)
Gene ID: HRGMv2_4661_7_13
Type: pfam
Location: 10049 - 10612 (+)
Type: pfam
Location: 10049 - 10612 (+)
Gene ID: HRGMv2_4661_7_14
Type: CAZyme
Location: 10593 - 13439 (+)
Type: CAZyme
Location: 10593 - 13439 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
CAG-628
Species
CAG-628 sp900553835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.