Cluster: HRGMv2_4659_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4659
- CGC Family ID: CGCFAM_00125
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4659_4 | HRGMv2_4659_4_62 | 77322 | 78395 | + | 9.B.146.1.1 |
| pfam | HRGMv2_4659_4 | HRGMv2_4659_4_63 | 78549 | 79517 | + | NAD_Gly3P_dh_N | ApbA | F420_oxidored | NAD_Gly3P_dh_C | GPD_NAD_C_bact |
| CAZyme | HRGMv2_4659_4 | HRGMv2_4659_4_64 | 79527 | 82175 | + | GT2 |
| CAZyme | HRGMv2_4659_4 | HRGMv2_4659_4_65 | 82184 | 83143 | + | GT2 |
Gene ID: HRGMv2_4659_4_62
Type: TC
Location: 77322 - 78395 (+)
Type: TC
Location: 77322 - 78395 (+)
Gene ID: HRGMv2_4659_4_63
Type: pfam
Location: 78549 - 79517 (+)
Type: pfam
Location: 78549 - 79517 (+)
Gene ID: HRGMv2_4659_4_64
Type: CAZyme
Location: 79527 - 82175 (+)
Type: CAZyme
Location: 79527 - 82175 (+)
Gene ID: HRGMv2_4659_4_65
Type: CAZyme
Location: 82184 - 83143 (+)
Type: CAZyme
Location: 82184 - 83143 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
CAG-1000
Species
CAG-1000 sp022774645
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.