Cluster: HRGMv2_4659_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4659
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4659_2 | HRGMv2_4659_2_188 | 198379 | 200961 | - | 3.A.3.2.22 |
| TC | HRGMv2_4659_2 | HRGMv2_4659_2_189 | 201018 | 202694 | - | 3.A.1.135.7 |
| pfam | HRGMv2_4659_2 | HRGMv2_4659_2_190 | 202804 | 203292 | + | dCMP_cyt_deam_1 | MafB19-deam |
| CAZyme | HRGMv2_4659_2 | HRGMv2_4659_2_191 | 203305 | 204231 | + | GT2 |
Gene ID: HRGMv2_4659_2_188
Type: TC
Location: 198379 - 200961 (-)
Type: TC
Location: 198379 - 200961 (-)
Gene ID: HRGMv2_4659_2_189
Type: TC
Location: 201018 - 202694 (-)
Type: TC
Location: 201018 - 202694 (-)
Gene ID: HRGMv2_4659_2_190
Type: pfam
Location: 202804 - 203292 (+)
Type: pfam
Location: 202804 - 203292 (+)
Gene ID: HRGMv2_4659_2_191
Type: CAZyme
Location: 203305 - 204231 (+)
Type: CAZyme
Location: 203305 - 204231 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
CAG-1000
Species
CAG-1000 sp022774645
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.