Cluster: HRGMv2_4656_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4656
- CGC Family ID: CGCFAM_01715
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4656_25 | HRGMv2_4656_25_7 | 5276 | 6025 | + | 3.A.1.20.1 |
| pfam | HRGMv2_4656_25 | HRGMv2_4656_25_8 | 6012 | 6806 | + | BPD_transp_1 |
| pfam | HRGMv2_4656_25 | HRGMv2_4656_25_9 | 6829 | 7401 | - | Ham1p_like |
| TC | HRGMv2_4656_25 | HRGMv2_4656_25_10 | 7481 | 10075 | - | 3.A.3.2.22 |
| pfam | HRGMv2_4656_25 | HRGMv2_4656_25_11 | 10192 | 10977 | + | VCA0040-like |
| NULL(UNKNOWN) | HRGMv2_4656_25 | HRGMv2_4656_25_12 | 11113 | 11907 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4656_25 | HRGMv2_4656_25_13 | 12222 | 13307 | - | GT2 |
Gene ID: HRGMv2_4656_25_7
Type: TC
Location: 5276 - 6025 (+)
Type: TC
Location: 5276 - 6025 (+)
Gene ID: HRGMv2_4656_25_8
Type: pfam
Location: 6012 - 6806 (+)
Type: pfam
Location: 6012 - 6806 (+)
Gene ID: HRGMv2_4656_25_9
Type: pfam
Location: 6829 - 7401 (-)
Type: pfam
Location: 6829 - 7401 (-)
Gene ID: HRGMv2_4656_25_10
Type: TC
Location: 7481 - 10075 (-)
Type: TC
Location: 7481 - 10075 (-)
Gene ID: HRGMv2_4656_25_11
Type: pfam
Location: 10192 - 10977 (+)
Type: pfam
Location: 10192 - 10977 (+)
Gene ID: HRGMv2_4656_25_12
Type:
Location: 11113 - 11907 (+)
Type:
Location: 11113 - 11907 (+)
Gene ID: HRGMv2_4656_25_13
Type: CAZyme
Location: 12222 - 13307 (-)
Type: CAZyme
Location: 12222 - 13307 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
UMGS1572
Species
UMGS1572 sp900553045
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.