Cluster: HRGMv2_4656_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4656
- CGC Family ID: CGCFAM_02367
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4656_12 | HRGMv2_4656_12_22 | 23952 | 25232 | + | CBM50 | CBM50 | CBM50 |
| NULL(UNKNOWN) | HRGMv2_4656_12 | HRGMv2_4656_12_23 | 25282 | 25746 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4656_12 | HRGMv2_4656_12_24 | 25807 | 27921 | - | 3.A.9.1.2 |
| CAZyme | HRGMv2_4656_12 | HRGMv2_4656_12_25 | 28050 | 29375 | + | CBM50 | CBM50 | CBM50 |
| TC | HRGMv2_4656_12 | HRGMv2_4656_12_26 | 29646 | 32036 | + | 3.A.3.23.2 |
Gene ID: HRGMv2_4656_12_22
Type: CAZyme
Location: 23952 - 25232 (+)
Type: CAZyme
Location: 23952 - 25232 (+)
Gene ID: HRGMv2_4656_12_23
Type:
Location: 25282 - 25746 (-)
Type:
Location: 25282 - 25746 (-)
Gene ID: HRGMv2_4656_12_24
Type: TC
Location: 25807 - 27921 (-)
Type: TC
Location: 25807 - 27921 (-)
Gene ID: HRGMv2_4656_12_25
Type: CAZyme
Location: 28050 - 29375 (+)
Type: CAZyme
Location: 28050 - 29375 (+)
Gene ID: HRGMv2_4656_12_26
Type: TC
Location: 29646 - 32036 (+)
Type: TC
Location: 29646 - 32036 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
UMGS1572
Species
UMGS1572 sp900553045
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.