Cluster: HRGMv2_4656_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4656
- CGC Family ID: CGCFAM_00528
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4656_6 | HRGMv2_4656_6_1 | 454 | 1725 | - | GT2 |
| CAZyme | HRGMv2_4656_6 | HRGMv2_4656_6_2 | 1815 | 2612 | + | CE4 |
| NULL(UNKNOWN) | HRGMv2_4656_6 | HRGMv2_4656_6_3 | 2868 | 3161 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_4656_6 | HRGMv2_4656_6_4 | 3164 | 3334 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4656_6 | HRGMv2_4656_6_5 | 3707 | 5293 | + | 3.A.11.1.4 |
Gene ID: HRGMv2_4656_6_1
Type: CAZyme
Location: 454 - 1725 (-)
Type: CAZyme
Location: 454 - 1725 (-)
Gene ID: HRGMv2_4656_6_2
Type: CAZyme
Location: 1815 - 2612 (+)
Type: CAZyme
Location: 1815 - 2612 (+)
Gene ID: HRGMv2_4656_6_3
Type:
Location: 2868 - 3161 (+)
Type:
Location: 2868 - 3161 (+)
Gene ID: HRGMv2_4656_6_4
Type:
Location: 3164 - 3334 (+)
Type:
Location: 3164 - 3334 (+)
Gene ID: HRGMv2_4656_6_5
Type: TC
Location: 3707 - 5293 (+)
Type: TC
Location: 3707 - 5293 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
UMGS1572
Species
UMGS1572 sp900553045
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.