Cluster: HRGMv2_4655_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4655
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4655_2 | HRGMv2_4655_2_196 | 189730 | 190419 | + | GT51 |
| TF | HRGMv2_4655_2 | HRGMv2_4655_2_197 | 190511 | 191173 | + | Trans_reg_C |
| STP | HRGMv2_4655_2 | HRGMv2_4655_2_198 | 191170 | 192186 | + | HATPase_c |
| TC | HRGMv2_4655_2 | HRGMv2_4655_2_199 | 192305 | 193072 | + | 3.A.1.134.12 |
| TC | HRGMv2_4655_2 | HRGMv2_4655_2_200 | 193062 | 195092 | + | 3.A.1.134.7 |
Gene ID: HRGMv2_4655_2_196
Type: CAZyme
Location: 189730 - 190419 (+)
Type: CAZyme
Location: 189730 - 190419 (+)
Gene ID: HRGMv2_4655_2_197
Type: TF
Location: 190511 - 191173 (+)
Type: TF
Location: 190511 - 191173 (+)
Gene ID: HRGMv2_4655_2_198
Type: STP
Location: 191170 - 192186 (+)
Type: STP
Location: 191170 - 192186 (+)
Gene ID: HRGMv2_4655_2_199
Type: TC
Location: 192305 - 193072 (+)
Type: TC
Location: 192305 - 193072 (+)
Gene ID: HRGMv2_4655_2_200
Type: TC
Location: 193062 - 195092 (+)
Type: TC
Location: 193062 - 195092 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
CAJMSU01
Species
CAJMSU01 sp905216155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4655_2_200 | vegan > vegetarian | 1.30117 | 0.02466 |