Cluster: HRGMv2_4652_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4652
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4652_7 | HRGMv2_4652_7_39 | 47475 | 48590 | - | GT28 |
| TC | HRGMv2_4652_7 | HRGMv2_4652_7_40 | 48577 | 49710 | - | 2.A.103.1.1 |
| TC | HRGMv2_4652_7 | HRGMv2_4652_7_41 | 49720 | 50796 | - | 9.B.146.1.3 |
Gene ID: HRGMv2_4652_7_39
Type: CAZyme
Location: 47475 - 48590 (-)
Type: CAZyme
Location: 47475 - 48590 (-)
Gene ID: HRGMv2_4652_7_40
Type: TC
Location: 48577 - 49710 (-)
Type: TC
Location: 48577 - 49710 (-)
Gene ID: HRGMv2_4652_7_41
Type: TC
Location: 49720 - 50796 (-)
Type: TC
Location: 49720 - 50796 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAZU01
Species
CAZU01 sp934255405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.