Cluster: HRGMv2_4652_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4652
- CGC Family ID: CGCFAM_00346
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4652_1 | HRGMv2_4652_1_214 | 226347 | 226991 | - | 9.B.186.1.2 |
| NULL(UNKNOWN) | HRGMv2_4652_1 | HRGMv2_4652_1_215 | 227338 | 227571 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_4652_1 | HRGMv2_4652_1_216 | 227616 | 228704 | + | Aminotran_1_2 |
| CAZyme | HRGMv2_4652_1 | HRGMv2_4652_1_217 | 228691 | 229695 | + | GT2 |
Gene ID: HRGMv2_4652_1_214
Type: TC
Location: 226347 - 226991 (-)
Type: TC
Location: 226347 - 226991 (-)
Gene ID: HRGMv2_4652_1_215
Type:
Location: 227338 - 227571 (+)
Type:
Location: 227338 - 227571 (+)
Gene ID: HRGMv2_4652_1_216
Type: STP
Location: 227616 - 228704 (+)
Type: STP
Location: 227616 - 228704 (+)
Gene ID: HRGMv2_4652_1_217
Type: CAZyme
Location: 228691 - 229695 (+)
Type: CAZyme
Location: 228691 - 229695 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAZU01
Species
CAZU01 sp934255405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.