Cluster: HRGMv2_4652_CGC13
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4652
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4652_16 | HRGMv2_4652_16_13 | 12359 | 13483 | + | GT4 |
| STP | HRGMv2_4652_16 | HRGMv2_4652_16_14 | 13549 | 14580 | - | ATPase_2 |
| TC | HRGMv2_4652_16 | HRGMv2_4652_16_15 | 14624 | 15571 | - | 9.B.126.2.1 |
Gene ID: HRGMv2_4652_16_13
Type: CAZyme
Location: 12359 - 13483 (+)
Type: CAZyme
Location: 12359 - 13483 (+)
Gene ID: HRGMv2_4652_16_14
Type: STP
Location: 13549 - 14580 (-)
Type: STP
Location: 13549 - 14580 (-)
Gene ID: HRGMv2_4652_16_15
Type: TC
Location: 14624 - 15571 (-)
Type: TC
Location: 14624 - 15571 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAZU01
Species
CAZU01 sp934255405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.