Cluster: HRGMv2_4642_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4642
- CGC Family ID: CGCFAM_04493
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4642_10 | HRGMv2_4642_10_4 | 3259 | 5958 | + | 5.A.1.5.3 |
| peptidase | HRGMv2_4642_10 | HRGMv2_4642_10_5 | 6052 | 6798 | + | M20.UNW |
| CAZyme | HRGMv2_4642_10 | HRGMv2_4642_10_6 | 6964 | 7908 | + | GT2 |
Gene ID: HRGMv2_4642_10_4
Type: TC
Location: 3259 - 5958 (+)
Type: TC
Location: 3259 - 5958 (+)
Gene ID: HRGMv2_4642_10_5
Type: peptidase
Location: 6052 - 6798 (+)
Type: peptidase
Location: 6052 - 6798 (+)
Gene ID: HRGMv2_4642_10_6
Type: CAZyme
Location: 6964 - 7908 (+)
Type: CAZyme
Location: 6964 - 7908 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAZU01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.