Cluster: HRGMv2_4642_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4642
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4642_7 | HRGMv2_4642_7_41 | 44237 | 45337 | - | GT28 |
| TC | HRGMv2_4642_7 | HRGMv2_4642_7_42 | 45324 | 46463 | - | 2.A.103.1.1 |
| TC | HRGMv2_4642_7 | HRGMv2_4642_7_43 | 46486 | 47553 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_4642_7_41
Type: CAZyme
Location: 44237 - 45337 (-)
Type: CAZyme
Location: 44237 - 45337 (-)
Gene ID: HRGMv2_4642_7_42
Type: TC
Location: 45324 - 46463 (-)
Type: TC
Location: 45324 - 46463 (-)
Gene ID: HRGMv2_4642_7_43
Type: TC
Location: 46486 - 47553 (-)
Type: TC
Location: 46486 - 47553 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAZU01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.