Cluster: HRGMv2_4642_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4642
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4642_15 | HRGMv2_4642_15_11 | 9899 | 12490 | + | 3.A.9.1.2 |
| NULL(UNKNOWN) | HRGMv2_4642_15 | HRGMv2_4642_15_12 | 12532 | 12885 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4642_15 | HRGMv2_4642_15_13 | 12946 | 13971 | - | GT2 |
Gene ID: HRGMv2_4642_15_11
Type: TC
Location: 9899 - 12490 (+)
Type: TC
Location: 9899 - 12490 (+)
Gene ID: HRGMv2_4642_15_12
Type:
Location: 12532 - 12885 (+)
Type:
Location: 12532 - 12885 (+)
Gene ID: HRGMv2_4642_15_13
Type: CAZyme
Location: 12946 - 13971 (-)
Type: CAZyme
Location: 12946 - 13971 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAZU01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.