Cluster: HRGMv2_4642_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4642
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4642_2 | HRGMv2_4642_2_76 | 76644 | 77936 | - | 9.B.174.1.1 |
| STP | HRGMv2_4642_2 | HRGMv2_4642_2_77 | 77955 | 79166 | - | Peptidase_M23 |
| pfam | HRGMv2_4642_2 | HRGMv2_4642_2_78 | 79172 | 80704 | - | Phosphodiest | Metalloenzyme | iPGM_N |
| CAZyme | HRGMv2_4642_2 | HRGMv2_4642_2_79 | 80785 | 82566 | - | GT51 |
Gene ID: HRGMv2_4642_2_76
Type: TC
Location: 76644 - 77936 (-)
Type: TC
Location: 76644 - 77936 (-)
Gene ID: HRGMv2_4642_2_77
Type: STP
Location: 77955 - 79166 (-)
Type: STP
Location: 77955 - 79166 (-)
Gene ID: HRGMv2_4642_2_78
Type: pfam
Location: 79172 - 80704 (-)
Type: pfam
Location: 79172 - 80704 (-)
Gene ID: HRGMv2_4642_2_79
Type: CAZyme
Location: 80785 - 82566 (-)
Type: CAZyme
Location: 80785 - 82566 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAZU01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.