Cluster: HRGMv2_4640_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4640
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4640_104 | HRGMv2_4640_104_3 | 670 | 1596 | - | GT2 |
| TC | HRGMv2_4640_104 | HRGMv2_4640_104_4 | 1814 | 2734 | + | 2.A.7.3.36 |
| TC | HRGMv2_4640_104 | HRGMv2_4640_104_5 | 2819 | 3949 | + | 2.A.6.2.46 |
| TC | HRGMv2_4640_104 | HRGMv2_4640_104_6 | 3946 | 5151 | + | 2.A.6.2.29 |
Gene ID: HRGMv2_4640_104_3
Type: CAZyme
Location: 670 - 1596 (-)
Type: CAZyme
Location: 670 - 1596 (-)
Gene ID: HRGMv2_4640_104_4
Type: TC
Location: 1814 - 2734 (+)
Type: TC
Location: 1814 - 2734 (+)
Gene ID: HRGMv2_4640_104_5
Type: TC
Location: 2819 - 3949 (+)
Type: TC
Location: 2819 - 3949 (+)
Gene ID: HRGMv2_4640_104_6
Type: TC
Location: 3946 - 5151 (+)
Type: TC
Location: 3946 - 5151 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
UBA3637
Genus
UBA7488
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.