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Cluster: HRGMv2_4629_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4629_26 HRGMv2_4629_26_29 34498 37605 + 2.A.6.2.4
TC HRGMv2_4629_26 HRGMv2_4629_26_30 37903 39240 + 1.A.26.1.2
pfam HRGMv2_4629_26 HRGMv2_4629_26_31 39318 39908 + DUF4112
NULL(UNKNOWN) HRGMv2_4629_26 HRGMv2_4629_26_32 39919 40224 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4629_26 HRGMv2_4629_26_33 40361 41266 - 9.B.1.1.6
CAZyme HRGMv2_4629_26 HRGMv2_4629_26_34 41481 42353 - GH23
pfam HRGMv2_4629_26 HRGMv2_4629_26_35 42847 43752 + ATP_bind_3
pfam HRGMv2_4629_26 HRGMv2_4629_26_36 43949 44332 + SCP2
CAZyme HRGMv2_4629_26 HRGMv2_4629_26_37 44391 45500 - GH23
Gene ID: HRGMv2_4629_26_29
Type: TC
Location: 34498 - 37605 (+)
Gene ID: HRGMv2_4629_26_30
Type: TC
Location: 37903 - 39240 (+)
Gene ID: HRGMv2_4629_26_31
Type: pfam
Location: 39318 - 39908 (+)
Gene ID: HRGMv2_4629_26_32
Type:
Location: 39919 - 40224 (+)
Gene ID: HRGMv2_4629_26_33
Type: TC
Location: 40361 - 41266 (-)
Gene ID: HRGMv2_4629_26_34
Type: CAZyme
Location: 41481 - 42353 (-)
Gene ID: HRGMv2_4629_26_35
Type: pfam
Location: 42847 - 43752 (+)
Gene ID: HRGMv2_4629_26_36
Type: pfam
Location: 43949 - 44332 (+)
Gene ID: HRGMv2_4629_26_37
Type: CAZyme
Location: 44391 - 45500 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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