Cluster: HRGMv2_4629_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4629
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4629_22 | HRGMv2_4629_22_42 | 40290 | 41876 | - | 3.A.1.5.24 |
| TC | HRGMv2_4629_22 | HRGMv2_4629_22_43 | 41851 | 42864 | - | 3.A.1.5.21 |
| TC | HRGMv2_4629_22 | HRGMv2_4629_22_44 | 42861 | 43931 | - | 3.A.1.5.24 |
| TC | HRGMv2_4629_22 | HRGMv2_4629_22_45 | 43947 | 45797 | - | 3.A.1.5.21 |
| CAZyme | HRGMv2_4629_22 | HRGMv2_4629_22_46 | 45804 | 49040 | - | GH23 |
Gene ID: HRGMv2_4629_22_42
Type: TC
Location: 40290 - 41876 (-)
Type: TC
Location: 40290 - 41876 (-)
Gene ID: HRGMv2_4629_22_43
Type: TC
Location: 41851 - 42864 (-)
Type: TC
Location: 41851 - 42864 (-)
Gene ID: HRGMv2_4629_22_44
Type: TC
Location: 42861 - 43931 (-)
Type: TC
Location: 42861 - 43931 (-)
Gene ID: HRGMv2_4629_22_45
Type: TC
Location: 43947 - 45797 (-)
Type: TC
Location: 43947 - 45797 (-)
Gene ID: HRGMv2_4629_22_46
Type: CAZyme
Location: 45804 - 49040 (-)
Type: CAZyme
Location: 45804 - 49040 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Moraxellaceae
Genus
Acinetobacter
Species
Acinetobacter beijerinckii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.