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Cluster: HRGMv2_4629_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4629_17 HRGMv2_4629_17_55 50770 51594 + CBM50
TF HRGMv2_4629_17 HRGMv2_4629_17_56 51725 52654 + HTH_1
peptidase HRGMv2_4629_17 HRGMv2_4629_17_57 52694 55327 - S16.UPW
TC HRGMv2_4629_17 HRGMv2_4629_17_58 55578 57752 + 2.A.1.25.5
STP HRGMv2_4629_17 HRGMv2_4629_17_59 57755 58156 + Glyoxalase
TC HRGMv2_4629_17 HRGMv2_4629_17_60 58290 59258 + 2.A.28.3.4
Gene ID: HRGMv2_4629_17_55
Type: CAZyme
Location: 50770 - 51594 (+)
Gene ID: HRGMv2_4629_17_56
Type: TF
Location: 51725 - 52654 (+)
Gene ID: HRGMv2_4629_17_57
Type: peptidase
Location: 52694 - 55327 (-)
Gene ID: HRGMv2_4629_17_58
Type: TC
Location: 55578 - 57752 (+)
Gene ID: HRGMv2_4629_17_59
Type: STP
Location: 57755 - 58156 (+)
Gene ID: HRGMv2_4629_17_60
Type: TC
Location: 58290 - 59258 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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