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Cluster: HRGMv2_4629_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4629_14 HRGMv2_4629_14_26 33921 34622 + 2.A.89.3.8
pfam HRGMv2_4629_14 HRGMv2_4629_14_27 34732 35778 + NMO
pfam HRGMv2_4629_14 HRGMv2_4629_14_28 35823 37901 - PP_kinase | PP_kinase_N | PP_kinase_C | PP_kinase_C_1
CAZyme HRGMv2_4629_14 HRGMv2_4629_14_29 38014 38688 - GT51
TC HRGMv2_4629_14 HRGMv2_4629_14_30 38761 39567 + 9.B.104.1.3
TC HRGMv2_4629_14 HRGMv2_4629_14_31 39564 42050 - 3.A.1.122.15
TC HRGMv2_4629_14 HRGMv2_4629_14_32 42047 42751 - 3.A.1.122.15
Gene ID: HRGMv2_4629_14_26
Type: TC
Location: 33921 - 34622 (+)
Gene ID: HRGMv2_4629_14_27
Type: pfam
Location: 34732 - 35778 (+)
Gene ID: HRGMv2_4629_14_28
Type: pfam
Location: 35823 - 37901 (-)
Gene ID: HRGMv2_4629_14_29
Type: CAZyme
Location: 38014 - 38688 (-)
Gene ID: HRGMv2_4629_14_30
Type: TC
Location: 38761 - 39567 (+)
Gene ID: HRGMv2_4629_14_31
Type: TC
Location: 39564 - 42050 (-)
Gene ID: HRGMv2_4629_14_32
Type: TC
Location: 42047 - 42751 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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